Osmium in PDB 3n44: Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus.

The structure of Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus., PDB code: 3n44 was solved by J.Voss, M.C.Vaney, S.Duquerroy, F.A.Rey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.30 / 2.35
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	58.089, 89.954, 174.018, 90.00, 90.00, 90.00
R / Rfree (%)	22.9 / 25

The binding sites of Osmium atom in the Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus. (pdb code 3n44). This binding sites where shown within 5.0 Angstroms radius around Osmium atom.
In total 6 binding sites of Osmium where determined in the Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus., PDB code: 3n44:
Jump to Osmium binding site number: 1; 2; 3; 4; 5; 6;

Osmium binding site 1 out of 6 in the Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus.


Mono view


Stereo pair view

A full contact list of Osmium with other atoms in the Os binding site number 1 of Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus. within 5.0Å range: probe atom residue distance (Å) B Occ B:Os361 b:81.9 occ:0.31 NE2 B:HIS18 2.2 46.6 1.0 CE1 B:HIS18 2.9 47.3 1.0 CD2 B:HIS18 3.4 45.4 1.0 CB B:PRO20 3.7 46.2 1.0 NE2 F:HIS230 4.1 38.0 1.0 CD2 F:HIS230 4.1 37.9 1.0 CA B:PRO20 4.1 44.7 1.0 ND1 B:HIS18 4.1 47.1 1.0 CG B:HIS18 4.3 43.9 1.0 N B:PRO20 4.4 43.0 1.0 CG B:PRO20 4.5 49.0 1.0 CE1 F:HIS230 4.6 37.4 1.0 CD B:PRO20 4.6 43.3 1.0 CG F:HIS230 4.6 35.8 1.0 CG2 F:THR228 4.7 38.0 1.0 ND1 F:HIS230 4.9 37.6 1.0

Osmium binding site 2 out of 6 in the Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus.


Mono view


Stereo pair view

A full contact list of Osmium with other atoms in the Os binding site number 2 of Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus. within 5.0Å range: probe atom residue distance (Å) B Occ B:Os362 b:0.7 occ:0.41 NE2 B:HIS142 2.6 73.1 1.0 CE1 B:HIS142 3.4 74.0 1.0 CD2 B:HIS142 3.5 71.6 1.0 ND1 B:HIS142 4.5 73.8 1.0 CG B:HIS142 4.6 70.2 1.0 O B:LYS140 4.6 62.2 1.0 CD B:PRO292 4.6 67.9 1.0 CG B:PRO292 4.8 71.4 1.0

Osmium binding site 3 out of 6 in the Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus.


Mono view


Stereo pair view

A full contact list of Osmium with other atoms in the Os binding site number 3 of Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus. within 5.0Å range: probe atom residue distance (Å) B Occ B:Os363 b:0.7 occ:0.46 NE2 B:HIS130 2.8 60.2 1.0 O B:HOH426 3.4 59.2 1.0 CD2 B:HIS130 3.4 58.9 1.0 CE1 B:HIS130 3.9 61.3 1.0 CE F:LYS245 4.0 80.3 1.0 CD F:LYS245 4.2 68.8 1.0 CG B:HIS130 4.6 57.6 1.0 NZ F:LYS245 4.7 90.5 1.0 ND1 B:HIS130 4.8 61.4 1.0 CB B:ASP132 5.0 56.4 1.0

Osmium binding site 4 out of 6 in the Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus.


Mono view


Stereo pair view

A full contact list of Osmium with other atoms in the Os binding site number 4 of Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus. within 5.0Å range: probe atom residue distance (Å) B Occ B:Os364 b:89.8 occ:0.29 N B:VAL8 3.8 54.4 1.0 CG1 B:VAL8 4.0 56.7 1.0 O B:PHE6 4.0 64.9 1.0 CE1 B:HIS62 4.1 56.7 1.0 NE2 B:HIS62 4.1 58.5 1.0 CD2 B:TYR9 4.2 54.5 1.0 CA B:ASN7 4.2 57.7 1.0 CE2 B:TYR9 4.3 55.8 1.0 OD1 B:ASN7 4.4 71.9 1.0 O B:HOH374 4.4 49.1 1.0 CB B:VAL8 4.4 56.8 1.0 CE2 B:PHE6 4.5 69.1 1.0 C B:ASN7 4.5 59.1 1.0 CD2 B:PHE6 4.6 67.0 1.0 CA B:VAL8 4.6 52.8 1.0 C B:PHE6 4.8 64.5 1.0 N B:ASN7 4.9 59.0 1.0

Osmium binding site 5 out of 6 in the Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus.


Mono view


Stereo pair view

A full contact list of Osmium with other atoms in the Os binding site number 5 of Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus. within 5.0Å range: probe atom residue distance (Å) B Occ F:Os454 b:0.9 occ:0.46 CG F:ARG366 4.1 62.8 1.0 CD F:ARG366 4.1 73.2 1.0 CD2 F:HIS375 4.2 68.9 1.0 NE2 F:HIS375 4.3 69.6 1.0 O F:GLU364 4.5 60.1 1.0 C F:GLU364 5.0 59.2 1.0

Osmium binding site 6 out of 6 in the Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus.


Mono view


Stereo pair view

A full contact list of Osmium with other atoms in the Os binding site number 6 of Crystal Structure of the Mature Envelope Glycoprotein Complex (Trypsin Cleavage; Osmium Soak) of Chikungunya Virus. within 5.0Å range: probe atom residue distance (Å) B Occ F:Os455 b:70.0 occ:0.24 CE2 F:TYR147 3.8 46.8 1.0 CZ F:TYR147 3.9 54.5 1.0 CD2 F:TYR147 4.1 45.2 1.0 CG2 F:THR145 4.2 43.9 1.0 CE1 F:TYR147 4.3 47.2 1.0 OH F:TYR147 4.3 56.5 1.0 CB F:SER130 4.4 39.2 1.0 C F:ALA146 4.4 42.6 1.0 CG F:TYR147 4.5 43.8 1.0 N F:TYR147 4.5 39.6 1.0 CA F:ALA146 4.6 38.8 1.0 CD1 F:TYR147 4.6 45.8 1.0 N F:ALA146 4.6 38.7 1.0 C F:THR145 4.8 42.6 1.0 O F:ALA146 4.8 41.8 1.0 O F:THR145 4.8 42.8 1.0 OG F:SER130 5.0 48.3 1.0

J.E.Voss, M.C.Vaney, S.Duquerroy, C.Vonrhein, C.Girard-Blanc, E.Crublet, A.Thompson, G.Bricogne, F.A.Rey. Glycoprotein Organization of Chikungunya Virus Particles Revealed By X-Ray Crystallography. Nature V. 468 709 2010.
ISSN: ISSN 0028-0836
PubMed: 21124458
DOI: 10.1038/NATURE09555