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Osmium in PDB 6hzl: Crystal Structure of Redox-Inhibited Phosphoribulokinase From Synechococcus Sp. (Strain Pcc 6301), Osmate Derivative

Enzymatic activity of Crystal Structure of Redox-Inhibited Phosphoribulokinase From Synechococcus Sp. (Strain Pcc 6301), Osmate Derivative

All present enzymatic activity of Crystal Structure of Redox-Inhibited Phosphoribulokinase From Synechococcus Sp. (Strain Pcc 6301), Osmate Derivative:
2.7.1.19;

Protein crystallography data

The structure of Crystal Structure of Redox-Inhibited Phosphoribulokinase From Synechococcus Sp. (Strain Pcc 6301), Osmate Derivative, PDB code: 6hzl was solved by R.H.Wilson, A.Bracher, F.U.Hartl, M.Hayer-Hartl, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.77
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 141.432, 141.432, 206.563, 90.00, 90.00, 120.00
R / Rfree (%) 23.5 / 25.9

Osmium Binding Sites:

The binding sites of Osmium atom in the Crystal Structure of Redox-Inhibited Phosphoribulokinase From Synechococcus Sp. (Strain Pcc 6301), Osmate Derivative (pdb code 6hzl). This binding sites where shown within 5.0 Angstroms radius around Osmium atom.
In total 2 binding sites of Osmium where determined in the Crystal Structure of Redox-Inhibited Phosphoribulokinase From Synechococcus Sp. (Strain Pcc 6301), Osmate Derivative, PDB code: 6hzl:
Jump to Osmium binding site number: 1; 2;

Osmium binding site 1 out of 2 in 6hzl

Go back to Osmium Binding Sites List in 6hzl
Osmium binding site 1 out of 2 in the Crystal Structure of Redox-Inhibited Phosphoribulokinase From Synechococcus Sp. (Strain Pcc 6301), Osmate Derivative


Mono view


Stereo pair view

A full contact list of Osmium with other atoms in the Os binding site number 1 of Crystal Structure of Redox-Inhibited Phosphoribulokinase From Synechococcus Sp. (Strain Pcc 6301), Osmate Derivative within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Os401

b:0.3
occ:1.00
NE2 A:HIS289 2.5 81.2 1.0
CE1 A:HIS289 2.6 82.8 1.0
OE1 A:GLN293 3.4 0.4 1.0
NE2 A:GLN293 3.6 0.8 1.0
CD2 A:HIS289 3.8 78.3 1.0
CD A:GLN293 3.9 0.1 1.0
ND1 A:HIS289 3.9 81.7 1.0
CG A:HIS289 4.5 79.0 1.0

Osmium binding site 2 out of 2 in 6hzl

Go back to Osmium Binding Sites List in 6hzl
Osmium binding site 2 out of 2 in the Crystal Structure of Redox-Inhibited Phosphoribulokinase From Synechococcus Sp. (Strain Pcc 6301), Osmate Derivative


Mono view


Stereo pair view

A full contact list of Osmium with other atoms in the Os binding site number 2 of Crystal Structure of Redox-Inhibited Phosphoribulokinase From Synechococcus Sp. (Strain Pcc 6301), Osmate Derivative within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Os402

b:0.5
occ:0.40
CD A:ARG144 3.1 0.2 1.0
NZ A:LYS141 3.3 0.1 1.0
NE A:ARG144 3.5 0.8 1.0
CZ A:ARG144 3.9 0.3 1.0
NH2 A:ARG144 3.9 0.2 1.0
CD A:LYS141 4.2 0.5 1.0
CE A:LYS141 4.2 0.8 1.0
CG A:ARG144 4.5 0.5 1.0
NH1 A:ARG144 4.8 0.7 1.0

Reference:

R.H.Wilson, M.Hayer-Hartl, A.Bracher. Crystal Structure of Phosphoribulokinase From Synechococcus Sp. Strain Pcc 6301. Acta Crystallogr.,Sect.F V. 75 278 2019.
ISSN: ESSN 2053-230X
PubMed: 30950829
DOI: 10.1107/S2053230X19002693
Page generated: Thu Oct 10 09:57:19 2024

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