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Osmium in PDB 2xro: Crystal Structure of Ttgv in Complex with Its Dna Operator

Protein crystallography data

The structure of Crystal Structure of Ttgv in Complex with Its Dna Operator, PDB code: 2xro was solved by D.Lu, S.Fillet, C.Meng, Y.Alguel, P.Kloppsteck, J.Bergeron, T.Krell, M.-T.Gallegos, J.Ramos, X.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.225 / 3.40
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 89.584, 89.584, 416.747, 90.00, 90.00, 120.00
R / Rfree (%) 21.39 / 28.23

Osmium Binding Sites:

The binding sites of Osmium atom in the Crystal Structure of Ttgv in Complex with Its Dna Operator (pdb code 2xro). This binding sites where shown within 5.0 Angstroms radius around Osmium atom.
In total 2 binding sites of Osmium where determined in the Crystal Structure of Ttgv in Complex with Its Dna Operator, PDB code: 2xro:
Jump to Osmium binding site number: 1; 2;

Osmium binding site 1 out of 2 in 2xro

Go back to Osmium Binding Sites List in 2xro
Osmium binding site 1 out of 2 in the Crystal Structure of Ttgv in Complex with Its Dna Operator


Mono view


Stereo pair view

A full contact list of Osmium with other atoms in the Os binding site number 1 of Crystal Structure of Ttgv in Complex with Its Dna Operator within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Os1001

b:0.9
occ:1.00
CA B:ASN83 4.4 0.3 1.0
N B:ASN83 4.5 0.1 1.0
O B:GLN80 4.5 87.3 1.0
O A:GLY28 4.8 87.3 1.0

Osmium binding site 2 out of 2 in 2xro

Go back to Osmium Binding Sites List in 2xro
Osmium binding site 2 out of 2 in the Crystal Structure of Ttgv in Complex with Its Dna Operator


Mono view


Stereo pair view

A full contact list of Osmium with other atoms in the Os binding site number 2 of Crystal Structure of Ttgv in Complex with Its Dna Operator within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Os1001

b:0.5
occ:1.00
O F:GLN80 4.4 97.4 1.0
CA F:ASN83 4.5 0.9 1.0
N F:ASN83 4.6 0.8 1.0
O E:GLY28 4.8 96.0 1.0

Reference:

D.Lu, S.Fillet, C.Meng, Y.Alguel, P.Kloppsteck, J.Bergeron, T.Krell, M.T.Gallegos, J.Ramos, X.Zhang. Crystal Structure of Ttgv in Complex with Its Dna Operator Reveals A General Model For Cooperative Dna Binding of Tetrameric Gene Regulators. Genes Dev. V. 24 2556 2010.
ISSN: ISSN 0890-9369
PubMed: 21078819
DOI: 10.1101/GAD.603510
Page generated: Wed Dec 16 02:01:17 2020

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